rs7249 chr19:18280361 C>T
- Sequence
gggtccccagggccgcaccctctc[C/T]aagtccggggcgcccacgacaccc
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) GM12878 (female B-cells lymphoblastoid cell line) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- TCF21_HUMAN GCR_HUMAN CDN1B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 2.03 | n/a | 2.00 | n/a | n/a | |||
| GCR_HUMAN | 1.70 | 0.89 | 1.08 | n/a | No Hit | |||
| CDN1B_HUMAN | 1.66 | -0.71 | 2.25 | n/a | n/a |
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