rs7251635 chr19:40420773 A>C

Sequence
gaccactggacagatgtccgggga[A/C]cccaagacggcggcaccgcagagc
ASB in cell types
22RV1 (prostate carcinoma) epidermal keratinocytes primary B-CLL cells
ASB for transcription factors
ANDR_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.94 -5.27 5.9·10-31.00 2.00 n/a No Hit
CTCF_HUMAN 1.01 0.14 0.021.00 1.59 2.23 Discordant
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Motif analysis

CTCF_HUMAN Discordant
CTCF_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) hdl cholesterol

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