rs7255545 chr19:4724722 G>A
- Sequence
ctacggaaaccggtaggcgtcagg[G/A]ttctttaaattctcctatagagat
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- ZN407_HUMAN STAT1_HUMAN FOXP1_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN407_HUMAN | n/a | 1.48 | 2.00 | n/a | n/a | |||
| STAT1_HUMAN | 1.90 | -1.15 | 3.00 | n/a | No Hit | |||
| FOXP1_HUMAN | 2.42 | -2.16 | 1.00 | n/a | No Hit | |||
| AHR_HUMAN | 2.25 | -1.83 | 1.00 | n/a | No Hit | |||
| IRF5_HUMAN | 2.06 | n/a | 1.00 | n/a | n/a |
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