rs72633823 chr1:17304284 G>A

Sequence
tacccagacacagagccactggga[G/A]agtcctctgaccctaattcctttc
ASB in cell types
BEAS-2B (bronchial epithelium) hTERT-HME1(Telomerase immortalized cell line)
ASB for transcription factors
GCR_HUMAN BRCA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN -0.01 2.83 0.884.0·10-5 1.00 n/a No Hit
BRCA2_HUMAN 1.94 -1.11 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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