ADASTRA v5.1.3
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rs72643474
chr1:2290738
G
>
A
Sequence
agggccccttctgccccagctagc[G/A]cttgggtgagggttgggcttgcgg
ASB in cell types
SKNO-1 (acute myeloid leukemia)
J-Lat A72
ASB for transcription factors
SMCA4_HUMAN
FLI1_HUMAN
ERG_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN
2.25
-0.24
5.8·10
-4
1.00
1.11
n/a
n/a
FLI1_HUMAN
0.73
2.67
1.00
0.04
1.17
n/a
No Hit
ERG_HUMAN
1.43
2.56
1.00
0.04
1.00
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)