rs72648511 chr1:24047290 C>T
- Sequence
ggagtgctgaggcaaggggtgccc[C/T]gccctatccaaaatctgtgttatg
- ASB in cell types
- HEK293 (embryonic kidney) TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- ZN629_HUMAN ZN449_HUMAN SMCA4_HUMAN GLIS2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN629_HUMAN | 3.03 | -5.54 | 2.00 | n/a | n/a | |||
| ZN449_HUMAN | 2.27 | n/a | 2.00 | -0.29 | Weak Concordant | |||
| SMCA4_HUMAN | 2.01 | -0.44 | 1.33 | n/a | n/a | |||
| GLIS2_HUMAN | 2.73 | n/a | 2.00 | n/a | n/a |
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Motif analysis
