rs72689909 chr8:143055912 C>T
- Sequence
gcggcagtgaatgctaacaggtat[C/T]gagttctctgatcaggaacaaaga
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) VCaP (prostate carcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- ESR1_HUMAN HXB13_HUMAN BRD4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.77 | 0.38 | 2.01 | n/a | No Hit | |||
| HXB13_HUMAN | 1.27 | 1.65 | 2.17 | n/a | No Hit | |||
| BRD4_HUMAN | 1.86 | -1.27 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Nerve_Tibial, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Thyroid, Whole_Blood