rs72691170 chr1:119317193 G>C
- Sequence
tgggcagagtggaactcatgagct[G/C]ggaggacaactagcatttattttt
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.24 | 0.70 | 1.06 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.99 | -2.17 | 1.00 | n/a | n/a |
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