rs7272287 chr20:22805382 G>A
- Sequence
gcagagtcagctgcgagaactgct[G/A]tggcttgccaaacaattccagtaa
- ASB in cell types
- CRC121 (colorectal cancer metastatic stem cells) CTR (Rhabdomyosarcoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- MYOD1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MYOD1_HUMAN | 2.71 | -2.78 | 1.00 | -4.11 | Concordant |
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Motif analysis
