rs7272299 chr20:47727674 T>G
- Sequence
cgcagggaacctctcctcctgggt[T/G]tgtgggcacaggtcacgtatcact
- ASB in cell types
- CD14+ monocytes macrophages ICN12 (primary pre-B acute lymphomablastic leukemia) germinal center B-cells
- ASB for transcription factors
- STAT1_HUMAN CEBPB_HUMAN PBX1_HUMAN CBP_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.37 | n/a | 3.00 | n/a | No Hit | |||
| CEBPB_HUMAN | 3.13 | -4.89 | 2.00 | n/a | No Hit | |||
| PBX1_HUMAN | 2.27 | -3.46 | 1.33 | n/a | No Hit | |||
| CBP_HUMAN | 3.23 | -3.73 | 2.00 | n/a | n/a | |||
| SRBP2_HUMAN | 2.38 | n/a | 4.00 | 1.56 | Weak Discordant |
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Motif analysis
