rs72801205 chr5:143036251 A>C
- Sequence
gtagaatgccttgtccactgtcct[A/C]agaaggtcaaagatgaacccattc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- COT1_HUMAN SRF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -1.66 | 1.66 | 1.00 | n/a | No Hit | |||
| SRF_HUMAN | 2.28 | -1.94 | 1.00 | -3.60 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
