rs7280904 chr21:41766700 A>C

Sequence
ccggcccggacaggccgagtggac[A/C]ttgtcggagccccgcggcctcgcc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.35 n/a 6.8·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  hdl cholesterol,  total cholesterol change with statins
GTEx eQTL Esophagus_Mucosa,  Heart_Atrial_Appendage,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Whole_Blood

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