rs72861946 chr1:12075859 A>T
- Sequence
gcatgaccataaaccacaaatgac[A/T]cctccaaccagaaacattccaaca
- ASB in cell types
- BEAS-2B (bronchial epithelium) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- GCR_HUMAN JUND_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.11 | 1.03 | 1.50 | n/a | No Hit | |||
| JUND_HUMAN | n/a | 2.79 | 1.33 | 3.55 | Concordant | |||
| TEAD4_HUMAN | -1.02 | 1.02 | 1.00 | n/a | No Hit |
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Motif analysis
