rs7287672 chr22:17159155 G>A
- Sequence
cggggcccacagcatagcacctgc[G/A]ggcggggcggccctggagccccgc
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma) MDA-MB-453 (breast adenocarcinoma)
- ASB for transcription factors
- NELFA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NELFA_HUMAN | -0.83 | 1.48 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid