rs7308916 chr12:58487874 A>G
- Sequence
accccagcagttactggctctgtg[A/G]ttttgggcaagttaagcaactatc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) BEAS-2B (bronchial epithelium) GM23248
- ASB for transcription factors
- GCR_HUMAN EZH2_HUMAN RUNX3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -1.83 | 1.99 | 1.00 | n/a | No Hit | |||
| EZH2_HUMAN | -1.78 | 2.05 | 1.00 | n/a | n/a | |||
| RUNX3_HUMAN | -2.56 | 2.48 | 1.00 | 7.76 | Concordant |
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Motif analysis
