rs7309029 chr12:124939956 A>G
- Sequence
tcaccatccccagaaaagaccaac[A/G]caaggggtaggggatgtagctcag
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) CTV-1 (Adult T acute lymphoblastic leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- RAD51_HUMAN MNT_HUMAN TBP_HUMAN LMBL2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD51_HUMAN | 2.82 | -2.88 | 1.50 | n/a | n/a | |||
| MNT_HUMAN | 1.65 | -0.24 | 1.56 | n/a | n/a | |||
| TBP_HUMAN | 2.53 | -4.62 | 1.75 | n/a | No Hit | |||
| LMBL2_HUMAN | 2.65 | n/a | 2.25 | n/a | n/a | |||
| FEZF1_HUMAN | -4.89 | 2.07 | 2.50 | n/a | No Hit |
Items per page:
1 – 5 of 16