rs73125255 chr5:75053789 G>C

Sequence
tcccagtccccgggccgcgcttcg[G/C]acaaagttctcaggcgcgcgcggt
ASB in cell types
HCT-116 (colon carcinoma) GM19240 (B cells Lymphoblastoid Cell Lines)
ASB for transcription factors
RAD21_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN -0.63 1.70 1.009.7·10-3 1.00 n/a n/a
STAG1_HUMAN -0.93 1.62 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Brain_Cerebellum Esophagus_Muscularis Testis

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