rs7313275 chr12:80764019 A>C
- Sequence
ctggtggtcagataaaaatttgca[A/C]cttcaagtgttcaaacggtttttt
- ASB in cell types
- K562 (myelogenous leukemia) KMS-11 (Plasma cell myeloma) PANC1 (pancreatic ductal adenocarcinoma) THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.61 | 1.15 | 1.36 | 1.88 | Weak Concordant | |||
| RAD21_HUMAN | 0.84 | 0.47 | 1.18 | n/a | n/a |
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Motif analysis
