rs73181272 chr7:157544869 A>G
- Sequence
gtgcgtgcatgcagctgtgtgtgg[A/G]tgtgcatcgtgtgtgggtgtgtag
- ASB in cell types
- HCT-116 (colon carcinoma)
- ASB for transcription factors
- EGR1_HUMAN SKP2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | -0.24 | 1.82 | 1.50 | 4.91 | Concordant | |||
| SKP2_HUMAN | -2.13 | 2.48 | 1.50 | n/a | n/a |
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Motif analysis
