rs73200742 chr8:10771846 C>T
- Sequence
atcagatagcaccttcccttgcct[C/T]gtgatgcaaactgcttctctaact
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MITF_HUMAN PRD10_HUMAN ATF4_HUMAN ARI1B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MITF_HUMAN | 2.71 | n/a | 2.00 | -1.03 | Weak Concordant | |||
| PRD10_HUMAN | 1.39 | n/a | 2.00 | n/a | n/a | |||
| ATF4_HUMAN | 3.01 | n/a | 2.00 | -0.02 | Weak Concordant | |||
| ARI1B_HUMAN | 2.06 | n/a | 2.00 | n/a | n/a | |||
| MTG16_HUMAN | 2.71 | -1.91 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood