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rs73331740 chr17:62423795 T>C

Sequence
ccggaccagactccagtgccgccc[T/C]gtcccgccaccctttttcccgccc
ASB in cell types
HEK293 (embryonic kidney) MCF10A (breast epithelial cells)
ASB for transcription factors
SP2_HUMAN LIN9_HUMAN ZBT11_HUMAN SCRT2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP2_HUMAN 2.57 n/a 1.4·10-121.00 1.50 2.51 Discordant
LIN9_HUMAN 2.67 -2.54 1.7·10-31.00 1.00 n/a n/a
ZBT11_HUMAN 2.22 n/a 2.0·10-31.00 2.00 n/a n/a
SCRT2_HUMAN 2.63 -2.25 0.021.00 1.00 n/a n/a
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Motif analysis

SP2_HUMAN Discordant
SP2_HUMAN pic

Genetic associations

No data available

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