rs73339828 chr17:51371851 G>C
- Sequence
agcacaaggatggatgggcttgca[G/C]cctccaggaaggaacactaagcgt
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.81 | -0.07 | 1.72 | n/a | No Hit | |||
| STAG1_HUMAN | 2.69 | 0.31 | 2.00 | n/a | n/a |
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