rs7334667 chr13:33304139 C>T

Sequence
tgaaatccactcactgcagacaca[C/T]cacaggccgaaggcccttacttct
ASB in cell types
MDM(monocyte derived macrophages) BEAS-2B (bronchial epithelium)
ASB for transcription factors
TF65_HUMAN GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 2.60 0.77 4.5·10-30.76 2.00 n/a No Hit
GCR_HUMAN 1.37 -0.44 0.021.00 1.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  primary rhegmatogenous retinal detachment,  rheumatoid arthritis
GTEx eQTL Thyroid

Download