rs7335875 chr13:75867255 C>G

Sequence
tgtgtgctcatcacaaagatgtga[C/G]gaaatggcacttgtaatctctgtc
ASB in cell types
MSC (mesenchymal stem cells)
ASB for transcription factors
CEBPB_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 2.21 -1.68 0.031.00 1.00 -0.82 Weak Concordant
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Motif analysis

CEBPB_HUMAN Weak Concordant
CEBPB_HUMAN pic

Genetic associations

GRASP college completion,  fasting blood glucose
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Small_Intestine_Terminal_Ileum,  Testis,  Thyroid

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