rs7338549 chr13:98490491 C>T
- Sequence
gtgggtcactcttcccatgtacta[C/T]cctagttccaaactgcattttgaa
- ASB in cell types
- HepG2 (hepatoblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HepG2 (hepatoblastoma) | 0.89 | 0.15 | 1.19 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), body mass index (bmi), college completion, hdl cholesterol, hypertension (early onset hypertension), neuroblastoma (brain cancer), triglycerides, years of education
GTEx eQTL Colon_Transverse, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood