rs73458420 chr13:30159001 C>T
- Sequence
tgtgagggaggcctgcagcgactc[C/T]ggcactgtgtggagccctgtgggt
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.09 | 0.97 | 1.30 | -0.04 | Weak Discordant | |||
| STAG1_HUMAN | -0.59 | 0.91 | 1.00 | n/a | n/a |
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Motif analysis
