rs73512347 chr19:2111013 C>T
- Sequence
gggtcccacaggcacaggaaggca[C/T]ggagaggggcgccccctagccgca
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.34 | 2.07 | 1.31 | -2.11 | Discordant | |||
| STAG1_HUMAN | -1.56 | 2.24 | 1.00 | n/a | n/a |
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Motif analysis
