rs7359282 chr15:85540655 A>G

Sequence
gctctgcagtttaaacacaaaagg[A/G]agaaagcagtgatggaagctttca
ASB in cell types
MDM(monocyte derived macrophages)
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.46 -0.33 1.7·10-51.00 2.06 -3.96 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP college completion,  hdl cholesterol,  refractive error,  systolic blood pressure (sbp),  years of education
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Anterior_cingulate_cortex_BA24,  Brain_Cortex,  Brain_Hippocampus,  Esophagus_Mucosa,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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