rs736354 chr2:41736229 A>G
- Sequence
ttaaccacaattatcctacttcct[A/G]tattagtaacatgctaacgttatc
- ASB in cell types
- THP-1 (acute monocytic leukemia) GM01310 ( Transformed lymphovlasoid cell line ) monocyte-derived dendritic cells monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- SPI1_HUMAN CDK9_HUMAN AHR_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.18 | 2.06 | 1.50 | 0.73 | Weak Concordant | |||
| CDK9_HUMAN | -0.99 | 1.56 | 1.00 | n/a | n/a | |||
| AHR_HUMAN | n/a | 2.49 | 1.00 | n/a | No Hit | |||
| STAT1_HUMAN | -0.05 | 2.19 | 2.00 | n/a | No Hit |
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Motif analysis
