ADASTRA v5.1.3
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rs73940770
chr19:46786674
A
>
C
Sequence
gggcctctgccccccgccctcctc[A/C]aagtgggggaggccattcttgggg
ASB in cell types
HL-60 (acute myeloid leukemia)
CD14+ monocytes
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
INT13_HUMAN
TAL1_HUMAN
STAT1_HUMAN
TF65_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
INT13_HUMAN
0.55
3.24
1.00
2.8·10
-5
1.00
n/a
n/a
TAL1_HUMAN
n/a
2.84
1.00
1.2·10
-3
1.00
n/a
No Hit
STAT1_HUMAN
2.67
n/a
5.1·10
-3
1.00
2.00
n/a
No Hit
TF65_HUMAN
2.56
-4.79
0.01
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)