rs73975139 chr2:174503602 C>T
- Sequence
tttgctgccagataacagtattga[C/T]atttaagatttactaggagtcaag
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP95 LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN A2NVP9_HUMAN TBP_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.48 | -0.50 | 2.22 | n/a | No Hit | |||
| FOXA1_HUMAN | 2.81 | -0.64 | 3.88 | -1.31 | Weak Concordant | |||
| A2NVP9_HUMAN | 2.28 | n/a | 2.50 | n/a | n/a | |||
| TBP_HUMAN | 2.41 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
