rs74055961 chr1:16896593 A>G
- Sequence
ctacgcagatgggtgctgttctcc[A/G]ggaagaaagcagggcctttggggc
- ASB in cell types
- K562 (myelogenous leukemia) Aska-SS (Biphasic synovial sarcoma) HeLa (cervical adenocarcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ARID2_HUMAN INT11_HUMAN PCF11_HUMAN INT13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARID2_HUMAN | 3.32 | n/a | 2.50 | n/a | n/a | |||
| INT11_HUMAN | 2.41 | 0.46 | 1.92 | n/a | n/a | |||
| PCF11_HUMAN | 2.00 | -1.27 | 1.50 | n/a | n/a | |||
| INT13_HUMAN | 2.02 | -0.21 | 1.50 | n/a | n/a |
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