rs74143168 chr10:80536099 C>T
- Sequence
gcccaggagaattgataggcgggc[C/T]ccgaagcacgtcttcccggaaacc
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) A549 (lung carcinoma) primary B-CLL cells
- ASB for transcription factors
- STAG1_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.41 | 1.13 | 1.11 | n/a | n/a | |||
| RAD21_HUMAN | 1.27 | 0.17 | 1.93 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood