rs74352093 chr1:40084938 C>T
- Sequence
gaagatgtccgttgccaagcggac[C/T]gtggtctagtggtagcgtcagtgc
- ASB in cell types
- THP-1 (acute monocytic leukemia) WA09 (embryonic stem cells) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN IKZF3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.24 | 2.00 | 3.47 | n/a | n/a | |||
| CTCF_HUMAN | 1.00 | 1.75 | 2.54 | -0.30 | Weak Discordant | |||
| IKZF3_HUMAN | -1.89 | 2.84 | 2.00 | n/a | n/a |
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Motif analysis
