rs74752729 chr12:107892158 A>G
- Sequence
tgcatagattaatgacaaatgacc[A/G]acaggaggcagcatctgctatggc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) LNCaP (prostate carcinoma) HT1080 (fibrosarcoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- FOXA1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.01 | 1.12 | 2.08 | n/a | No Hit | |||
| CTCF_HUMAN | 0.82 | 1.63 | 1.71 | -1.28 | Weak Discordant |
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Motif analysis
