rs74841285 chr8:8777940 C>T

Sequence
gccagctcaaaacgcccatcttaa[C/T]agacactgtcttgctgtcacttgt
ASB in cell types
K562 (myelogenous leukemia) adult erythroblasts
ASB for transcription factors
NCOR1_HUMAN NFIC_HUMAN TAL1_HUMAN KDM1A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NCOR1_HUMAN 1.71 -4.75 2.8·10-101.00 2.00 n/a n/a
NFIC_HUMAN 1.40 n/a 5.0·10-101.00 2.00 n/a No Hit
TAL1_HUMAN 1.54 -3.37 2.3·10-51.00 2.33 n/a No Hit
KDM1A_HUMAN 3.41 -3.94 3.0·10-51.00 2.00 n/a n/a
HTF4_HUMAN 0.79 0.61 1.9·10-30.76 2.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Hippocampus,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Thyroid

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