rs75137967 chr3:23743568 C>A
- Sequence
cggccccaccccccgccgcctcca[C/A]atgtcgctgtctgccccgggcacc
- ASB in cell types
- epithelial cell of prostate 22RV1 (prostate carcinoma) bipolar neuron HEK293 (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN ZN778_HUMAN ZFHX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.06 | 2.75 | 1.75 | 0.00 | Weak Discordant | |||
| ZN778_HUMAN | n/a | 4.23 | 2.00 | n/a | n/a | |||
| ZFHX2_HUMAN | 2.86 | -5.08 | 2.00 | n/a | n/a |
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Motif analysis
