rs7522315 chr1:226110298 T>C

Sequence
tccccggcagttccccccggctcc[T/C]ctgccgcctggcccgggagctgcc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 0.26 2.97 1.006.9·10-4 2.00 n/a No Hit
SPI1_HUMAN -0.71 1.57 1.000.01 1.80 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Mucosa,  Muscle_Skeletal,  Nerve_Tibial

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