rs75377165 chr20:23361902 C>G

Sequence
acttttcgcgactggccccgcccc[C/G]ctgtggcgtgccgcagcgcagacg
ASB in cell types
macrophages foreskin keratinocyte monocytes from periferal blood
ASB for transcription factors
SRBP2_HUMAN CTCF_HUMAN KMT2A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN 2.24 n/a 1.7·10-31.00 3.00 n/a No Hit
CTCF_HUMAN 1.39 -0.20 7.1·10-31.00 1.37 -5.24 Concordant
KMT2A_HUMAN -0.97 2.11 1.000.01 1.00 n/a n/a
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Esophagus_Mucosa Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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