rs75391517 chr3:196688484 G>C
- Sequence
ccacacttctttctacagaaacaa[G/C]aagtggagttatctgtcctgggct
- ASB in cell types
- macrophages form periferal blood macrophages HL-60 (acute myeloid leukemia) CD14+ monocytes
- ASB for transcription factors
- SPI1_HUMAN CEBPB_HUMAN STAT1_HUMAN INT13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.71 | -1.10 | 1.55 | -5.81 | Concordant | |||
| CEBPB_HUMAN | 2.67 | 0.38 | 1.81 | n/a | No Hit | |||
| STAT1_HUMAN | 1.76 | -3.68 | 2.00 | n/a | No Hit | |||
| INT13_HUMAN | 2.33 | -0.70 | 1.50 | n/a | n/a | |||
| BRD4_HUMAN | 1.76 | -0.13 | 1.00 | n/a | n/a |
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Motif analysis
