rs7549136 chr1:215114305 G>A
- Sequence
actaatgtagaaaacatgaggaaa[G/A]gtgccaagttcattttcagcgctg
- ASB in cell types
- T47D (invasive ductal carcinoma) breast tumor
- ASB for transcription factors
- FOXA1_HUMAN PRGR_HUMAN PCGF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.42 | 1.14 | 2.05 | n/a | No Hit | |||
| PRGR_HUMAN | -0.10 | 1.36 | 1.54 | n/a | No Hit | |||
| PCGF2_HUMAN | n/a | 2.19 | 1.00 | n/a | n/a |
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