rs75522 chr6:23566566 T>C
- Sequence
aaatgtaaatggacagatggttca[T/C]gggggctcctggaggccagccaaa
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma) LNCaP95
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.17 | 1.34 | 2.29 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.40 | 1.27 | 2.08 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP blood pressure response to candesartan treatment, fasting blood glucose, total cholesterol, years of education