rs75522 chr6:23566566 T>C

Sequence
aaatgtaaatggacagatggttca[T/C]gggggctcctggaggccagccaaa
ASB in cell types
VCaP (prostate carcinoma) LNCaP (prostate carcinoma) LNCaP95
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 0.17 1.34 1.002.6·10-7 2.29 n/a No Hit
FOXA1_HUMAN -0.40 1.27 1.000.01 2.08 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP blood pressure response to candesartan treatment,  fasting blood glucose,  total cholesterol,  years of education

Download