rs7555476 chr1:91845109 T>C
- Sequence
cttgtaagctttttccaagttgag[T/C]aataaacagaaataatagattttt
- ASB in cell types
- FaDu(Hypopharyngeal squamous cell carcinoma)
- ASB for transcription factors
- TF65_HUMAN CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.35 | -1.88 | 1.00 | n/a | No Hit | |||
| CEBPB_HUMAN | 0.24 | 1.35 | 1.65 | 4.84 | Concordant |
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Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, birth weight, hdl cholesterol change with statins, parkinsons disease, resistance to kuru in aged women despite likely exposure, triglycerides change with statins