rs7564698 chr2:168635396 G>T
- Sequence
gtgaagatgcactgctgggtgggt[G/T]tggaggcaggggatgaacgtgatg
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM19239 (male B-cells lymphoblastoid cell line) 22RV1 (prostate carcinoma) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.75 | -0.61 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.67 | -0.07 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | -1.10 | 2.42 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial