rs757273 chr17:40909680 A>G

Sequence
ttttaaaagtgaaaagcaaaatat[A/G]tcttctatttttaacttgttccct
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
TCF21_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 2.43 n/a 0.011.00 4.00 n/a n/a
ANDR_HUMAN 2.20 -0.02 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (choroidal neovascularization) vs. no amd hdl cholesterol ldl cholesterol change with statins
GTEx eQTL Cells_Cultured_fibroblasts Liver Lung Pituitary Spleen Testis Thyroid Whole_Blood

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