ADASTRA v5.1.3
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rs758212
chr10:114321014
G
>
A
Sequence
agaatagactcagcctaaacaggc[G/A]ctcacttcccacagagttcccagc
ASB in cell types
foreskin keratinocyte
Ishikawa (endometrial adenocarcinoma)
HCT-116 (colon carcinoma)
ASB for transcription factors
CTCF_HUMAN
ESR1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
-0.18
3.01
0.89
3.5·10
-4
3.00
n/a
No Hit
ESR1_HUMAN
0.30
1.08
1.00
0.04
2.23
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
GTEx eQTL
Artery_Aorta
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)