rs758212 chr10:114321014 G>A

Sequence
agaatagactcagcctaaacaggc[G/A]ctcacttcccacagagttcccagc
ASB in cell types
foreskin keratinocyte Ishikawa (endometrial adenocarcinoma) HCT-116 (colon carcinoma)
ASB for transcription factors
CTCF_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.18 3.01 0.893.5·10-4 3.00 n/a No Hit
ESR1_HUMAN 0.30 1.08 1.000.04 2.23 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Artery_Aorta Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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