rs7583414 chr2:227876186 A>T
- Sequence
cccgccagtacgccaggctaatta[A/T]tttttttgtatttttagtagagac
- ASB in cell types
- HS-ES-2M (Epithelioid sarcoma) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
- ASB for transcription factors
- JUN_HUMAN SMCA4_HUMAN ZN335_HUMAN SMRC1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.53 | -1.09 | 1.25 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.84 | -1.66 | 1.33 | n/a | n/a | |||
| ZN335_HUMAN | -2.45 | 2.39 | 1.00 | n/a | No Hit | |||
| SMRC1_HUMAN | 1.41 | -0.48 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Cells_Cultured_fibroblasts, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis