rs7586926 chr2:138536213 A>G

Sequence
ttttttcatgcctcgtaattttct[A/G]ttcaaagctggatattttatgtag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
RELB_HUMAN IKZF1_HUMAN NFAC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RELB_HUMAN 2.54 -2.58 0.021.00 1.00 n/a No Hit
IKZF1_HUMAN 1.90 -1.88 0.041.00 1.50 n/a No Hit
NFAC3_HUMAN 2.27 -1.94 0.041.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol

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