rs75934544 chr8:94553658 G>T
- Sequence
gagggcgccccctagaacgcagag[G/T]gggggcagagggaagtgagatggg
- ASB in cell types
- MS-1 (Small cell lung carcinoma) LNCaP C4-2B (prostate carcinoma) neural cell
- ASB for transcription factors
- CTCF_HUMAN ETS1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.22 | 1.01 | 1.25 | -0.90 | Weak Discordant | |||
| ETS1_HUMAN | 1.32 | -2.51 | 1.33 | n/a | No Hit |
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Motif analysis
