rs7608915 chr2:64989513 C>G
- Sequence
tcgcacctgctcctgcgccaggcc[C/G]ggagacccccggggcggcttccca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HEK293 (embryonic kidney) HEK293T (embryonic kidney) SUM159PT (Triple negative breast cancer)
- ASB for transcription factors
- ESR1_HUMAN PATZ1_HUMAN ZBTB6_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.40 | 0.24 | 1.90 | n/a | No Hit | |||
| PATZ1_HUMAN | -2.24 | 2.50 | 1.00 | n/a | No Hit | |||
| ZBTB6_HUMAN | -2.45 | 2.39 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Testis